General tools and trainings

Have questions on tools and trainings offered and promoted by Health-ri, find your answers here.

Health-RI XNAT

A user can have owner rights (full admin access), member rights (full access except deletion), or contributor rights (read-only access).

You can fill in the form in the Self-Service Desk -> Start page -> Services and Request Forms -> XNAT -> XNAT New User Request Form. This will first create a new account for the user in the self-service portal and ask the new user to agree to the Health-RI Terms of Use. After that, a new account will be created for the new user in XNAT.

You can use a so-called local CTP server to anonymize images and upload them to the central CTP. The central CTP then forwards the images to the XNAT pre-archive. The collection administrator can then approve the images after checking them, making them visible to everyone who has access to the collection.

You can go to https://xnat.health-ri.nl, go to login, and click on Forget login or password.

The principal investigator of the study must complete a Home -> Services and Request Forms -> XNAT-> New USER application for you on the Health-RI Self Service Portal. You must agree to the Health-RI terms of use by replying by email to the ticket you receive from servicedesk@health-ri.nl.

CTP is standalone software for (pseudo-)anonymization that can receive images from an MRI/CT/PET scanner, place the images in a queue for anonymization, and remove personal data stored in the dycom header of the images. More information can be found here: The CTP DICOM Anonymizer - MircWiki.

You can send an email to servicedesk@health-ri.nl. The service desk will send you an email asking you to agree to the Health-RI Terms of Use. You will also need to sign the EGD license and return it to servicedesk@health-ri.nl. Once everything has been agreed, the user will be granted access to the EGD collection (read rights).

 

Health-RI cBioPortal

  • You must request an sftp account in the Health-RI Self Service Portal to upload your research data.
  • After uploading, the Data Team will contact you.

Log in to the Health-RI Self Service Portal.
Go to: Home -> Services and Application Forms -> cBioportal -> cBioPortal sFTP account application form.

Health-RI Self Service Portal

To create your own Self Service Portal account with Health-RI:

Most emails sent to the service desk will receive a ticket code. When communicating with the service desk about your question, always use that ticket number (H-RIYYMM XXX) in the subject line.

With an account, you can track the status of your question via the Self Service Portal. There you can also communicate with the Health-RI Service Desk about this question.

Due to the use of Health-RI services, we ask you to agree to the terms of use of Health-RI.